WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50F4.11.1 Sequence Name  C50F4.11.1
Length (nt)  2205   Chromosome Location  V: 9541782-9544226
Chromosome . Primary Identifier  V Chromosome Location . Start  9541782
Chromosome Location . End  9544226 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50F4.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003160 mdf-1 C50F4.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50F4.11 C50F4.11 2040   V: 9541945-9542074

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50F4.11.1 9541782 9544226 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192892   293   V: 9541782-9542074 Caenorhabditis elegans
Exon192893   875   V: 9542161-9543035 Caenorhabditis elegans
Exon192894   269   V: 9543085-9543353 Caenorhabditis elegans
Exon192895   561   V: 9543409-9543969 Caenorhabditis elegans
Exon192896   207   V: 9544020-9544226 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50F4.11.1 9541782 9544226 -1

1 Sequence

Length
2205

1 Sequence Ontology Term

Identifier Name Description
transcript