WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C50F4.11 Sequence Name  C50F4.11
Length (nt)  2040   Chromosome Location  V: 9541945-9542074
Chromosome . Primary Identifier  V Chromosome Location . Start  9541945
Chromosome Location . End  9542074
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50F4.11

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28212 MDF-1 78.6 679 Caenorhabditis elegans
 

Other

30 RNAi

WormBase ID
WBRNAi00067426
WBRNAi00067533
WBRNAi00067594
WBRNAi00067797
WBRNAi00067953
WBRNAi00068027
WBRNAi00024880
WBRNAi00008541
WBRNAi00042937
WBRNAi00110457
WBRNAi00110458
WBRNAi00084094
WBRNAi00084104
WBRNAi00084108
WBRNAi00110459
WBRNAi00084071
WBRNAi00077102
WBRNAi00077101
WBRNAi00065934
WBRNAi00084059
WBRNAi00103224
WBRNAi00084066
WBRNAi00114626
WBRNAi00091614
WBRNAi00091618
WBRNAi00110453
WBRNAi00110455
WBRNAi00110454
WBRNAi00110456
WBRNAi00110460

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C50F4.11 9541945 9542074 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003160 mdf-1 C50F4.11 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C50F4.11 9541945 9542074 -1
CDS:C50F4.11 9542161 9543035 -1
CDS:C50F4.11 9543085 9543353 -1
CDS:C50F4.11 9543409 9543969 -1
CDS:C50F4.11 9544020 9544224 -1

1 Sequence

Length
2040

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C50F4.11.1 C50F4.11.1 2205   V: 9541782-9544226