WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F25B3.3a Sequence Name  F25B3.3a
Length (nt)  1965   Chromosome Location  V: 9556716-9556830
Chromosome . Primary Identifier  V Chromosome Location . Start  9556716
Chromosome Location . End  9556830
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25B3.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34003 RGEF-1, isoform a 74.0 654 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00045460
WBRNAi00031346

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F25B3.3a 9556716 9556830 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009100 rgef-1 F25B3.3 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:F25B3.3a 9556716 9556830 -1
CDS:F25B3.3a 9557590 9557721 -1
CDS:F25B3.3a 9557993 9558537 -1
CDS:F25B3.3a 9558885 9559143 -1
CDS:F25B3.3a 9559211 9559521 -1
CDS:F25B3.3a 9559776 9559856 -1
CDS:F25B3.3a 9559915 9560007 -1
CDS:F25B3.3a 9560890 9560944 -1
CDS:F25B3.3a 9560994 9561169 -1
CDS:F25B3.3a 9561360 9561475 -1
CDS:F25B3.3a 9561527 9561608 -1

1 Sequence

Length
1965

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F25B3.3a.1 F25B3.3a.1 2717   V: 9556027-9561671