WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F46B6.3a Sequence Name  F46B6.3a
Length (nt)  990   Chromosome Location  V: 9776303-9776317
Chromosome . Primary Identifier  V Chromosome Location . Start  9776303
Chromosome Location . End  9776317
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46B6.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26973 SMG-4, isoform a 38.8 329 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00094403
WBRNAi00047493
WBRNAi00047495
WBRNAi00008069
WBRNAi00015065
WBRNAi00094395
WBRNAi00094500
WBRNAi00085061

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F46B6.3a 9776303 9776317 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004882 smg-4 F46B6.3 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F46B6.3a 9776303 9776317 -1
CDS:F46B6.3a 9776663 9777171 -1
CDS:F46B6.3a 9777224 9777549 -1
CDS:F46B6.3a 9777603 9777742 -1

1 Sequence

Length
990

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F46B6.3a.1 F46B6.3a.1 1355   V: 9775939-9777743