WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y22F5A.4.1 Sequence Name  Y22F5A.4.1
Length (nt)  959   Chromosome Location  V: 10277904-10279056
Chromosome . Primary Identifier  V Chromosome Location . Start  10277904
Chromosome Location . End  10279056 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y22F5A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003090 lys-1 Y22F5A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y22F5A.4 Y22F5A.4 897   V: 10277908-10278369

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y22F5A.4.1 10277904 10279056 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195139   466   V: 10277904-10278369 Caenorhabditis elegans
Exon195140   493   V: 10278564-10279056 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y22F5A.4.1 10277904 10279056 1

1 Sequence

Length
959

1 Sequence Ontology Term

Identifier Name Description
transcript