WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:AC3.5a.1 Sequence Name  AC3.5a.1
Length (nt)  3422   Chromosome Location  V: 10388527-10393505
Chromosome . Primary Identifier  V Chromosome Location . Start  10388527
Chromosome Location . End  10393505 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
AC3.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007071 AC3.5 AC3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:AC3.5a AC3.5a 3273   V: 10388527-10388583

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:AC3.5a.1 10388527 10393505 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195510   57   V: 10388527-10388583 Caenorhabditis elegans
Exon195511   314   V: 10389278-10389591 Caenorhabditis elegans
Exon195513   120   V: 10389858-10389977 Caenorhabditis elegans
Exon195515   175   V: 10390177-10390351 Caenorhabditis elegans
Exon195517   461   V: 10390398-10390858 Caenorhabditis elegans
Exon195519   97   V: 10390909-10391005 Caenorhabditis elegans
Exon195521   121   V: 10391057-10391177 Caenorhabditis elegans
Exon195523   266   V: 10391254-10391519 Caenorhabditis elegans
Exon195525   201   V: 10391563-10391763 Caenorhabditis elegans
Exon195527   669   V: 10391806-10392474 Caenorhabditis elegans
Exon195529   221   V: 10392520-10392740 Caenorhabditis elegans
Exon195532   720   V: 10392786-10393505 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:AC3.5a.1 10388527 10393505 1

1 Sequence

Length
3422

1 Sequence Ontology Term

Identifier Name Description
transcript