WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:AC3.5a Sequence Name  AC3.5a
Length (nt)  3273   Chromosome Location  V: 10388527-10388583
Chromosome . Primary Identifier  V Chromosome Location . Start  10388527
Chromosome Location . End  10388583
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
AC3.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36372 AC3.5, isoform a 122.7 1090 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00038597
WBRNAi00009513
WBRNAi00027917
WBRNAi00088966

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:AC3.5a 10388527 10388583 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007071 AC3.5 AC3.5 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier 		Start End Strand
CDS:AC3.5a 10388527 10388583 1
CDS:AC3.5a 10389278 10389591 1
CDS:AC3.5a 10389858 10389977 1
CDS:AC3.5a 10390177 10390351 1
CDS:AC3.5a 10390398 10390858 1
CDS:AC3.5a 10390909 10391005 1
CDS:AC3.5a 10391057 10391177 1
CDS:AC3.5a 10391254 10391519 1
CDS:AC3.5a 10391563 10391763 1
CDS:AC3.5a 10391806 10392474 1
CDS:AC3.5a 10392520 10392740 1
CDS:AC3.5a 10392786 10393356 1

1 Sequence

Length
3273

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:AC3.5a.1 AC3.5a.1 3422   V: 10388527-10393505