WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28H7.9.1 Sequence Name  F28H7.9.1
Length (nt)  1189   Chromosome Location  V: 10760575-10762795
Chromosome . Primary Identifier  V Chromosome Location . Start  10760575
Chromosome Location . End  10762795 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28H7.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009242 sre-6 F28H7.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28H7.9 F28H7.9 1101   V: 10760658-10760867

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28H7.9.1 10760575 10762795 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196534   293   V: 10760575-10760867 Caenorhabditis elegans
Exon196535   70   V: 10761286-10761355 Caenorhabditis elegans
Exon196536   216   V: 10761407-10761622 Caenorhabditis elegans
Exon196537   103   V: 10761674-10761776 Caenorhabditis elegans
Exon196538   119   V: 10762152-10762270 Caenorhabditis elegans
Exon196539   97   V: 10762320-10762416 Caenorhabditis elegans
Exon196540   164   V: 10762459-10762622 Caenorhabditis elegans
Exon196541   127   V: 10762669-10762795 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28H7.9.1 10760575 10762795 -1

1 Sequence

Length
1189

1 Sequence Ontology Term

Identifier Name Description
transcript