WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00197045 Gene Name  C29A12.9
Sequence Name  ? C29A12.9 Organism  Caenorhabditis elegans
Biotype  SO:0001263 Genetic Position 
Length (nt)  ? 203
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00197045

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C29A12.9 C29A12.9 203   V: 10819943-10820145
 

Other

0 CDSs

0 RNAi Result

9 Allele

Public Name
gk963301
gk964451
gk964452
gk963495
gk963496
gk489776
gk823969
gk964220
gk964219

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00197045 10819943 10820145 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_10818713..10819942   1230 V: 10818713-10819942 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum Transcripts that showed significantly decreased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. GFold3, logFC < -1 or > 1. WBPaper00066703:L.plantarum-pdxH_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00197045 10819943 10820145 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
203

1 Sequence Ontology Term