WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53B7.5b.1 Sequence Name  F53B7.5b.1
Length (nt)  8873   Chromosome Location  V: 10970399-10981213
Chromosome . Primary Identifier  V Chromosome Location . Start  10970399
Chromosome Location . End  10981213 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B7.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009968 fig-1 F53B7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53B7.5b F53B7.5b 8697   V: 10970506-10970626

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53B7.5b.1 10970399 10981213 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197318   228   V: 10970399-10970626 Caenorhabditis elegans
Exon197320   152   V: 10970799-10970950 Caenorhabditis elegans
Exon197322   564   V: 10971254-10971817 Caenorhabditis elegans
Exon197323   197   V: 10971887-10972083 Caenorhabditis elegans
Exon197324   190   V: 10972131-10972320 Caenorhabditis elegans
Exon197325   1592   V: 10972364-10973955 Caenorhabditis elegans
Exon197326   487   V: 10974047-10974533 Caenorhabditis elegans
Exon197327   137   V: 10974586-10974722 Caenorhabditis elegans
Exon197328   547   V: 10974776-10975322 Caenorhabditis elegans
Exon197329   566   V: 10975375-10975940 Caenorhabditis elegans
Exon197330   291   V: 10975985-10976275 Caenorhabditis elegans
Exon197331   390   V: 10976354-10976743 Caenorhabditis elegans
Exon197332   342   V: 10976789-10977130 Caenorhabditis elegans
Exon197333   742   V: 10977175-10977916 Caenorhabditis elegans
Exon197334   339   V: 10977969-10978307 Caenorhabditis elegans
Exon197335   137   V: 10978368-10978504 Caenorhabditis elegans
Exon197336   1517   V: 10978547-10980063 Caenorhabditis elegans
Exon197337   28   V: 10980117-10980144 Caenorhabditis elegans
Exon197338   47   V: 10980188-10980234 Caenorhabditis elegans
Exon197339   297   V: 10980482-10980778 Caenorhabditis elegans
Exon197340   83   V: 10981131-10981213 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53B7.5b.1 10970399 10981213 -1

1 Sequence

Length
8873

1 Sequence Ontology Term

Identifier Name Description
transcript