WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53B7.5b Sequence Name  F53B7.5b
Length (nt)  8697   Chromosome Location  V: 10970506-10970626
Chromosome . Primary Identifier  V Chromosome Location . Start  10970506
Chromosome Location . End  10970626
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B7.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53054 FIG-1, isoform b 297.6 2898 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00048098
WBRNAi00015486
WBRNAi00091964

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53B7.5b 10970506 10970626 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009968 fig-1 F53B7.5 Caenorhabditis elegans

21 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53B7.5b 10970506 10970626 -1
CDS:F53B7.5b 10970799 10970950 -1
CDS:F53B7.5b 10971254 10971817 -1
CDS:F53B7.5b 10971887 10972083 -1
CDS:F53B7.5b 10972131 10972320 -1
CDS:F53B7.5b 10972364 10973955 -1
CDS:F53B7.5b 10974047 10974533 -1
CDS:F53B7.5b 10974586 10974722 -1
CDS:F53B7.5b 10974776 10975322 -1
CDS:F53B7.5b 10975375 10975940 -1
CDS:F53B7.5b 10975985 10976275 -1
CDS:F53B7.5b 10976354 10976743 -1
CDS:F53B7.5b 10976789 10977130 -1
CDS:F53B7.5b 10977175 10977916 -1
CDS:F53B7.5b 10977969 10978307 -1
CDS:F53B7.5b 10978368 10978504 -1
CDS:F53B7.5b 10978547 10980063 -1
CDS:F53B7.5b 10980117 10980144 -1
CDS:F53B7.5b 10980188 10980234 -1
CDS:F53B7.5b 10980482 10980778 -1
CDS:F53B7.5b 10981131 10981144 -1

1 Sequence

Length
8697

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53B7.5b.1 F53B7.5b.1 8873   V: 10970399-10981213