WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C13G3.3c Sequence Name  C13G3.3c
Length (nt)  1824   Chromosome Location  V: 11027513-11027656
Chromosome . Primary Identifier  V Chromosome Location . Start  11027513
Chromosome Location . End  11027656
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13G3.3c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41982 PPTR-2, isoform c 69.9 607 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00040455
WBRNAi00010699
WBRNAi00086450
WBRNAi00086451
WBRNAi00033277
WBRNAi00085912
WBRNAi00064518
WBRNAi00085913
WBRNAi00086448
WBRNAi00062121
WBRNAi00079107

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C13G3.3c 11027513 11027656 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007554 pptr-2 C13G3.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C13G3.3c 11027513 11027656 -1
CDS:C13G3.3c 11027713 11028774 -1
CDS:C13G3.3c 11028818 11029131 -1
CDS:C13G3.3c 11029178 11029270 -1
CDS:C13G3.3c 11029322 11029387 -1
CDS:C13G3.3c 11030680 11030824 -1

1 Sequence

Length
1824

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C13G3.3c.1 C13G3.3c.1 1824   V: 11027513-11030824