WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R13H4.1 Sequence Name  R13H4.1
Length (nt)  3918   Chromosome Location  V: 11831278-11831358
Chromosome . Primary Identifier  V Chromosome Location . Start  11831278
Chromosome Location . End  11831358
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13H4.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38409 NPHP-4 148.7 1305 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00051935
WBRNAi00051936
WBRNAi00060980
WBRNAi00060981
WBRNAi00017847
WBRNAi00034929

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R13H4.1 11831278 11831358 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011261 nphp-4 R13H4.1 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:R13H4.1 11831278 11831358 -1
CDS:R13H4.1 11831402 11831569 -1
CDS:R13H4.1 11832414 11832559 -1
CDS:R13H4.1 11835958 11836085 -1
CDS:R13H4.1 11838027 11838131 -1
CDS:R13H4.1 11838177 11838810 -1
CDS:R13H4.1 11838990 11839385 -1
CDS:R13H4.1 11840312 11840588 -1
CDS:R13H4.1 11840631 11840811 -1
CDS:R13H4.1 11841010 11841882 -1
CDS:R13H4.1 11841944 11842080 -1
CDS:R13H4.1 11842250 11842437 -1
CDS:R13H4.1 11842487 11842677 -1
CDS:R13H4.1 11842727 11842802 -1
CDS:R13H4.1 11843197 11843278 -1
CDS:R13H4.1 11843323 11843451 -1
CDS:R13H4.1 11843500 11843625 -1

1 Sequence

Length
3918

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R13H4.1.1 R13H4.1.1 4102   V: 11831197-11843728