WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27A7.4.1 Sequence Name  C27A7.4.1
Length (nt)  4383   Chromosome Location  V: 12144244-12150707
Chromosome . Primary Identifier  V Chromosome Location . Start  12144244
Chromosome Location . End  12150707 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A7.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000490 che-11 C27A7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27A7.4 C27A7.4 4314   V: 12144295-12144634

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.4.1 12144244 12150707 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200981   391   V: 12144244-12144634 Caenorhabditis elegans
Exon200982   173   V: 12144677-12144849 Caenorhabditis elegans
Exon200983   213   V: 12144894-12145106 Caenorhabditis elegans
Exon200984   122   V: 12145149-12145270 Caenorhabditis elegans
Exon200985   671   V: 12145318-12145988 Caenorhabditis elegans
Exon200986   96   V: 12146037-12146132 Caenorhabditis elegans
Exon200987   381   V: 12146180-12146560 Caenorhabditis elegans
Exon200988   109   V: 12146608-12146716 Caenorhabditis elegans
Exon200989   214   V: 12146763-12146976 Caenorhabditis elegans
Exon200990   282   V: 12147085-12147366 Caenorhabditis elegans
Exon200991   118   V: 12147412-12147529 Caenorhabditis elegans
Exon200992   266   V: 12147579-12147844 Caenorhabditis elegans
Exon200993   252   V: 12147891-12148142 Caenorhabditis elegans
Exon200994   116   V: 12148633-12148748 Caenorhabditis elegans
Exon200995   322   V: 12148794-12149115 Caenorhabditis elegans
Exon200996   193   V: 12149719-12149911 Caenorhabditis elegans
Exon200997   122   V: 12149961-12150082 Caenorhabditis elegans
Exon200998   86   V: 12150130-12150215 Caenorhabditis elegans
Exon200999   133   V: 12150301-12150433 Caenorhabditis elegans
Exon201000   123   V: 12150585-12150707 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27A7.4.1 12144244 12150707 -1

1 Sequence

Length
4383

1 Sequence Ontology Term

Identifier Name Description
transcript