WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C27A7.5a Sequence Name  C27A7.5a
Length (nt)  2142   Chromosome Location  V: 12155027-12155215
Chromosome . Primary Identifier  V Chromosome Location . Start  12155027
Chromosome Location . End  12155215
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A7.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20527 C27A7.5, isoform a 79.1 713 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00001782
WBRNAi00041312
WBRNAi00011238
WBRNAi00029255

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C27A7.5a 12155027 12155215 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007756 C27A7.5 C27A7.5 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:C27A7.5a 12155027 12155215 -1
CDS:C27A7.5a 12155264 12155379 -1
CDS:C27A7.5a 12155488 12155600 -1
CDS:C27A7.5a 12155648 12155903 -1
CDS:C27A7.5a 12155962 12156031 -1
CDS:C27A7.5a 12156284 12156481 -1
CDS:C27A7.5a 12156531 12156745 -1
CDS:C27A7.5a 12156796 12157210 -1
CDS:C27A7.5a 12157259 12157413 -1
CDS:C27A7.5a 12158049 12158175 -1
CDS:C27A7.5a 12160298 12160437 -1
CDS:C27A7.5a 12160859 12160951 -1
CDS:C27A7.5a 12162243 12162297 -1

1 Sequence

Length
2142

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C27A7.5a.1 C27A7.5a.1 2325   V: 12154867-12162320