WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK863.4.2 Sequence Name  ZK863.4.2
Length (nt)  2396   Chromosome Location  V: 12181348-12184185
Chromosome . Primary Identifier  V Chromosome Location . Start  12181348
Chromosome Location . End  12184185 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK863.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014124 usip-1 ZK863.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK863.4 ZK863.4 1989   V: 12181745-12182092

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK863.4.2 12181348 12184185 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201093   745   V: 12181348-12182092 Caenorhabditis elegans
Exon201096   258   V: 12182147-12182404 Caenorhabditis elegans
Exon201098   148   V: 12182451-12182598 Caenorhabditis elegans
Exon201100   248   V: 12182648-12182895 Caenorhabditis elegans
Exon201102   165   V: 12182942-12183106 Caenorhabditis elegans
Exon201104   183   V: 12183149-12183331 Caenorhabditis elegans
Exon201106   87   V: 12183378-12183464 Caenorhabditis elegans
Exon201108   276   V: 12183523-12183798 Caenorhabditis elegans
Exon201110   126   V: 12183847-12183972 Caenorhabditis elegans
Exon201111   160   V: 12184026-12184185 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK863.4.2 12181348 12184185 -1

1 Sequence

Length
2396

1 Sequence Ontology Term

Identifier Name Description
transcript