WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W04D2.6c.1 Sequence Name  W04D2.6c.1
Length (nt)  2393   Chromosome Location  V: 12498213-12503705
Chromosome . Primary Identifier  V Chromosome Location . Start  12498213
Chromosome Location . End  12503705 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04D2.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012245 rbm-25 W04D2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W04D2.6c W04D2.6c 2124   V: 12498293-12498332

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W04D2.6c.1 12498213 12503705 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201887   120   V: 12498213-12498332 Caenorhabditis elegans
Exon201890   59   V: 12498405-12498463 Caenorhabditis elegans
Exon201892   105   V: 12498512-12498616 Caenorhabditis elegans
Exon201894   156   V: 12498665-12498820 Caenorhabditis elegans
Exon201896   61   V: 12498876-12498936 Caenorhabditis elegans
Exon201898   135   V: 12499254-12499388 Caenorhabditis elegans
Exon201900   95   V: 12499499-12499593 Caenorhabditis elegans
Exon201904   101   V: 12501275-12501375 Caenorhabditis elegans
Exon201907   568   V: 12501665-12502232 Caenorhabditis elegans
Exon201908   523   V: 12502564-12503086 Caenorhabditis elegans
Exon201913   191   V: 12503190-12503380 Caenorhabditis elegans
Exon201915   279   V: 12503427-12503705 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W04D2.6c.1 12498213 12503705 1

1 Sequence

Length
2393

1 Sequence Ontology Term

Identifier Name Description
transcript