WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W04D2.6c Sequence Name  W04D2.6c
Length (nt)  2124   Chromosome Location  V: 12498293-12498332
Chromosome . Primary Identifier  V Chromosome Location . Start  12498293
Chromosome Location . End  12498332
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04D2.6c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46822 RBM-25, isoform c 82.7 707 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00066452
WBRNAi00054771
WBRNAi00026486
WBRNAi00022461
WBRNAi00066441
WBRNAi00066443
WBRNAi00066442
WBRNAi00066444
WBRNAi00066447
WBRNAi00066448
WBRNAi00066453
WBRNAi00002022
WBRNAi00066450
WBRNAi00086959
WBRNAi00086958
WBRNAi00086960
WBRNAi00087171
WBRNAi00066446
WBRNAi00027494
WBRNAi00086961
WBRNAi00087190
WBRNAi00086962

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W04D2.6c 12498293 12498332 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012245 rbm-25 W04D2.6 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:W04D2.6c 12498293 12498332 1
CDS:W04D2.6c 12498405 12498463 1
CDS:W04D2.6c 12498512 12498616 1
CDS:W04D2.6c 12498665 12498820 1
CDS:W04D2.6c 12498876 12498936 1
CDS:W04D2.6c 12499254 12499388 1
CDS:W04D2.6c 12499499 12499593 1
CDS:W04D2.6c 12501275 12501375 1
CDS:W04D2.6c 12501665 12502232 1
CDS:W04D2.6c 12502564 12503086 1
CDS:W04D2.6c 12503190 12503380 1
CDS:W04D2.6c 12503427 12503516 1

1 Sequence

Length
2124

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W04D2.6c.1 W04D2.6c.1 2393   V: 12498213-12503705