WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10C8.1.1 Sequence Name  K10C8.1.1
Length (nt)  1757   Chromosome Location  V: 12692486-12695255
Chromosome . Primary Identifier  V Chromosome Location . Start  12692486
Chromosome Location . End  12695255 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10C8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010734 parn-1 K10C8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10C8.1 K10C8.1 1701   V: 12692541-12692592

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10C8.1.1 12692486 12695255 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202324   107   V: 12692486-12692592 Caenorhabditis elegans
Exon202325   75   V: 12692638-12692712 Caenorhabditis elegans
Exon202326   78   V: 12692763-12692840 Caenorhabditis elegans
Exon202327   303   V: 12692888-12693190 Caenorhabditis elegans
Exon202328   765   V: 12693819-12694583 Caenorhabditis elegans
Exon202329   198   V: 12694633-12694830 Caenorhabditis elegans
Exon202330   231   V: 12695025-12695255 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10C8.1.1 12692486 12695255 -1

1 Sequence

Length
1757

1 Sequence Ontology Term

Identifier Name Description
transcript