WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07F10.1a.1 Sequence Name  T07F10.1a.1
Length (nt)  3278   Chromosome Location  V: 12859444-12863837
Chromosome . Primary Identifier  V Chromosome Location . Start  12859444
Chromosome Location . End  12863837 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07F10.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011587 anp-1 T07F10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07F10.1a T07F10.1a 2967   V: 12859444-12859479

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07F10.1a.1 12859444 12863837 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202902   36   V: 12859444-12859479 Caenorhabditis elegans
Exon202903   146   V: 12859534-12859679 Caenorhabditis elegans
Exon202905   178   V: 12859938-12860115 Caenorhabditis elegans
Exon202907   213   V: 12860312-12860524 Caenorhabditis elegans
Exon202909   354   V: 12860577-12860930 Caenorhabditis elegans
Exon202911   185   V: 12860977-12861161 Caenorhabditis elegans
Exon202913   208   V: 12861330-12861537 Caenorhabditis elegans
Exon202915   467   V: 12861591-12862057 Caenorhabditis elegans
Exon202917   202   V: 12862117-12862318 Caenorhabditis elegans
Exon202919   299   V: 12862365-12862663 Caenorhabditis elegans
Exon202921   135   V: 12862711-12862845 Caenorhabditis elegans
Exon202923   168   V: 12862891-12863058 Caenorhabditis elegans
Exon202925   147   V: 12863104-12863250 Caenorhabditis elegans
Exon202928   540   V: 12863298-12863837 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07F10.1a.1 12859444 12863837 1

1 Sequence

Length
3278

1 Sequence Ontology Term

Identifier Name Description
transcript