WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07F10.1b.1 Sequence Name  T07F10.1b.1
Length (nt)  3234   Chromosome Location  V: 12859534-12863829
Chromosome . Primary Identifier  V Chromosome Location . Start  12859534
Chromosome Location . End  12863829 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07F10.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011587 anp-1 T07F10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07F10.1b T07F10.1b 2931   V: 12859534-12859679

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07F10.1b.1 12859534 12863829 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202904   146   V: 12859534-12859679 Caenorhabditis elegans
Exon202906   178   V: 12859938-12860115 Caenorhabditis elegans
Exon202908   213   V: 12860312-12860524 Caenorhabditis elegans
Exon202910   354   V: 12860577-12860930 Caenorhabditis elegans
Exon202912   185   V: 12860977-12861161 Caenorhabditis elegans
Exon202914   208   V: 12861330-12861537 Caenorhabditis elegans
Exon202916   467   V: 12861591-12862057 Caenorhabditis elegans
Exon202918   202   V: 12862117-12862318 Caenorhabditis elegans
Exon202920   299   V: 12862365-12862663 Caenorhabditis elegans
Exon202922   135   V: 12862711-12862845 Caenorhabditis elegans
Exon202924   168   V: 12862891-12863058 Caenorhabditis elegans
Exon202926   147   V: 12863104-12863250 Caenorhabditis elegans
Exon202927   532   V: 12863298-12863829 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07F10.1b.1 12859534 12863829 1

1 Sequence

Length
3234

1 Sequence Ontology Term

Identifier Name Description
transcript