WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07G4.3.1 Sequence Name  W07G4.3.1
Length (nt)  4325   Chromosome Location  V: 13036894-13041721
Chromosome . Primary Identifier  V Chromosome Location . Start  13036894
Chromosome Location . End  13041721 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07G4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012337 scyl-1 W07G4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07G4.3 W07G4.3 2463   V: 13038756-13038886

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W07G4.3.1 13036894 13041721 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203419   1993   V: 13036894-13038886 Caenorhabditis elegans
Exon203420   150   V: 13038941-13039090 Caenorhabditis elegans
Exon203421   265   V: 13039197-13039461 Caenorhabditis elegans
Exon203422   188   V: 13039509-13039696 Caenorhabditis elegans
Exon203423   671   V: 13039745-13040415 Caenorhabditis elegans
Exon203424   394   V: 13040468-13040861 Caenorhabditis elegans
Exon203425   298   V: 13040911-13041208 Caenorhabditis elegans
Exon203426   123   V: 13041258-13041380 Caenorhabditis elegans
Exon203427   123   V: 13041426-13041548 Caenorhabditis elegans
Exon203428   120   V: 13041602-13041721 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W07G4.3.1 13036894 13041721 -1

1 Sequence

Length
4325

1 Sequence Ontology Term

Identifier Name Description
transcript