WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W07G4.3 Sequence Name  W07G4.3
Length (nt)  2463   Chromosome Location  V: 13038756-13038886
Chromosome . Primary Identifier  V Chromosome Location . Start  13038756
Chromosome Location . End  13038886
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07G4.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42738 SCYL-1 90.1 820 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00054963
WBRNAi00019706
WBRNAi00036367
WBRNAi00080601

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W07G4.3 13038756 13038886 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012337 scyl-1 W07G4.3 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:W07G4.3 13038756 13038886 -1
CDS:W07G4.3 13038941 13039090 -1
CDS:W07G4.3 13039197 13039461 -1
CDS:W07G4.3 13039509 13039696 -1
CDS:W07G4.3 13039745 13040415 -1
CDS:W07G4.3 13040468 13040861 -1
CDS:W07G4.3 13040911 13041208 -1
CDS:W07G4.3 13041258 13041380 -1
CDS:W07G4.3 13041426 13041548 -1
CDS:W07G4.3 13041602 13041721 -1

1 Sequence

Length
2463

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W07G4.3.1 W07G4.3.1 4325   V: 13036894-13041721