WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C50B6.11 Sequence Name  C50B6.11
Length (nt)  1101   Chromosome Location  V: 13340240-13340381
Chromosome . Primary Identifier  V Chromosome Location . Start  13340240
Chromosome Location . End  13340381
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50B6.11

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42944 LGC-48 42.7 366 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00042848
WBRNAi00012173

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:C50B6.11 13340240 13340381 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008223 lgc-48 C50B6.11 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier 		Start End Strand
CDS:C50B6.11 13340240 13340381 1
CDS:C50B6.11 13340807 13340930 1
CDS:C50B6.11 13341258 13341317 1
CDS:C50B6.11 13341373 13341487 1
CDS:C50B6.11 13341541 13341623 1
CDS:C50B6.11 13341803 13341875 1
CDS:C50B6.11 13341918 13341971 1
CDS:C50B6.11 13342196 13342308 1
CDS:C50B6.11 13342357 13342493 1
CDS:C50B6.11 13342544 13342704 1
CDS:C50B6.11 13343002 13343040 1

1 Sequence

Length
1101

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C50B6.11.1 C50B6.11.1 1101   V: 13340240-13343040