WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T10G3.5b Sequence Name  T10G3.5b
Length (nt)  3612   Chromosome Location  V: 13491365-13491586
Chromosome . Primary Identifier  V Chromosome Location . Start  13491365
Chromosome Location . End  13491586
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10G3.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37989 EEA-1, isoform b 139.5 1203 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00053068
WBRNAi00018557
WBRNAi00078222

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T10G3.5b 13491365 13491586 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011696 eea-1 T10G3.5 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:T10G3.5b 13491365 13491586 -1
CDS:T10G3.5b 13491978 13492153 -1
CDS:T10G3.5b 13492202 13492475 -1
CDS:T10G3.5b 13492791 13493054 -1
CDS:T10G3.5b 13493102 13493329 -1
CDS:T10G3.5b 13493375 13493704 -1
CDS:T10G3.5b 13494725 13495612 -1
CDS:T10G3.5b 13495941 13496015 -1
CDS:T10G3.5b 13496110 13497045 -1
CDS:T10G3.5b 13497093 13497266 -1
CDS:T10G3.5b 13497323 13497367 -1

1 Sequence

Length
3612

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T10G3.5b.1 T10G3.5b.1 3617   V: 13491365-13497372