WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53F4.14.1 Sequence Name  F53F4.14.1
Length (nt)  1683   Chromosome Location  V: 13627613-13629831
Chromosome . Primary Identifier  V Chromosome Location . Start  13627613
Chromosome Location . End  13629831 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53F4.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009996 sde-2 F53F4.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53F4.14 F53F4.14 1503   V: 13627659-13627737

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53F4.14.1 13627613 13629831 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204994   125   V: 13627613-13627737 Caenorhabditis elegans
Exon204995   593   V: 13627817-13628409 Caenorhabditis elegans
Exon204997   504   V: 13628456-13628959 Caenorhabditis elegans
Exon204999   461   V: 13629371-13629831 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53F4.14.1 13627613 13629831 1

1 Sequence

Length
1683

1 Sequence Ontology Term

Identifier Name Description
transcript