WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53F4.14 Sequence Name  F53F4.14
Length (nt)  1503   Chromosome Location  V: 13627659-13627737
Chromosome . Primary Identifier  V Chromosome Location . Start  13627659
Chromosome Location . End  13627737
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53F4.14

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29593 SDE-2 57.3 500 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00000601
WBRNAi00048151
WBRNAi00015524
WBRNAi00077844
WBRNAi00007722

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53F4.14 13627659 13627737 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009996 sde-2 F53F4.14 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53F4.14 13627659 13627737 1
CDS:F53F4.14 13627817 13628409 1
CDS:F53F4.14 13628456 13628959 1
CDS:F53F4.14 13629371 13629697 1

1 Sequence

Length
1503

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53F4.14.2 F53F4.14.2 1733   V: 13627573-13629841
Transcript:F53F4.14.1 F53F4.14.1 1683   V: 13627613-13629831