WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H39E23.1g.1 Sequence Name  H39E23.1g.1
Length (nt)  3126   Chromosome Location  V: 14112802-14126206
Chromosome . Primary Identifier  V Chromosome Location . Start  14112802
Chromosome Location . End  14126206 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H39E23.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003916 par-1 H39E23.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H39E23.1g H39E23.1g 3126   V: 14112802-14112915

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H39E23.1g.1 14112802 14126206 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206376   114   V: 14112802-14112915 Caenorhabditis elegans
Exon206387   118   V: 14112966-14113083 Caenorhabditis elegans
Exon206401   246   V: 14113569-14113814 Caenorhabditis elegans
Exon206428   125   V: 14115458-14115582 Caenorhabditis elegans
Exon206443   234   V: 14116447-14116680 Caenorhabditis elegans
Exon206460   268   V: 14117503-14117770 Caenorhabditis elegans
Exon206484   583   V: 14120061-14120643 Caenorhabditis elegans
Exon206502   286   V: 14120733-14121018 Caenorhabditis elegans
Exon206518   144   V: 14121369-14121512 Caenorhabditis elegans
Exon206533   108   V: 14122208-14122315 Caenorhabditis elegans
Exon206548   804   V: 14122994-14123797 Caenorhabditis elegans
Exon206552   96   V: 14126111-14126206 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H39E23.1g.1 14112802 14126206 -1

1 Sequence

Length
3126

1 Sequence Ontology Term

Identifier Name Description
transcript