WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H39E23.1c.1 Sequence Name  H39E23.1c.1
Length (nt)  3189   Chromosome Location  V: 14112802-14128838
Chromosome . Primary Identifier  V Chromosome Location . Start  14112802
Chromosome Location . End  14128838 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H39E23.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003916 par-1 H39E23.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H39E23.1c H39E23.1c 3189   V: 14112802-14112915

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H39E23.1c.1 14112802 14128838 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206378   114   V: 14112802-14112915 Caenorhabditis elegans
Exon206382   118   V: 14112966-14113083 Caenorhabditis elegans
Exon206396   246   V: 14113569-14113814 Caenorhabditis elegans
Exon206420   125   V: 14115458-14115582 Caenorhabditis elegans
Exon206436   234   V: 14116447-14116680 Caenorhabditis elegans
Exon206451   268   V: 14117503-14117770 Caenorhabditis elegans
Exon206475   583   V: 14120061-14120643 Caenorhabditis elegans
Exon206493   286   V: 14120733-14121018 Caenorhabditis elegans
Exon206509   144   V: 14121369-14121512 Caenorhabditis elegans
Exon206524   108   V: 14122208-14122315 Caenorhabditis elegans
Exon206539   804   V: 14122994-14123797 Caenorhabditis elegans
Exon206555   133   V: 14126111-14126243 Caenorhabditis elegans
Exon206576   26   V: 14128813-14128838 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H39E23.1c.1 14112802 14128838 -1

1 Sequence

Length
3189

1 Sequence Ontology Term

Identifier Name Description
transcript