WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H39E23.1f.1 Sequence Name  H39E23.1f.1
Length (nt)  3312   Chromosome Location  V: 14112802-14131788
Chromosome . Primary Identifier  V Chromosome Location . Start  14112802
Chromosome Location . End  14131788 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H39E23.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003916 par-1 H39E23.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H39E23.1f H39E23.1f 3312   V: 14112802-14112915

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H39E23.1f.1 14112802 14131788 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206379   114   V: 14112802-14112915 Caenorhabditis elegans
Exon206386   118   V: 14112966-14113083 Caenorhabditis elegans
Exon206400   246   V: 14113569-14113814 Caenorhabditis elegans
Exon206427   125   V: 14115458-14115582 Caenorhabditis elegans
Exon206442   234   V: 14116447-14116680 Caenorhabditis elegans
Exon206459   268   V: 14117503-14117770 Caenorhabditis elegans
Exon206483   583   V: 14120061-14120643 Caenorhabditis elegans
Exon206501   286   V: 14120733-14121018 Caenorhabditis elegans
Exon206517   144   V: 14121369-14121512 Caenorhabditis elegans
Exon206532   108   V: 14122208-14122315 Caenorhabditis elegans
Exon206547   804   V: 14122994-14123797 Caenorhabditis elegans
Exon206563   133   V: 14126111-14126243 Caenorhabditis elegans
Exon206579   149   V: 14131640-14131788 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H39E23.1f.1 14112802 14131788 -1

1 Sequence

Length
3312

1 Sequence Ontology Term

Identifier Name Description
transcript