WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T16A9.4c.1 Sequence Name  T16A9.4c.1
Length (nt)  2962   Chromosome Location  V: 14215345-14226469
Chromosome . Primary Identifier  V Chromosome Location . Start  14215345
Chromosome Location . End  14226469 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16A9.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011794 nep-21 T16A9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T16A9.4c T16A9.4c 2571   V: 14215681-14215857

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T16A9.4c.1 14215345 14226469 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206871   513   V: 14215345-14215857 Caenorhabditis elegans
Exon206876   105   V: 14215904-14216008 Caenorhabditis elegans
Exon206880   118   V: 14216366-14216483 Caenorhabditis elegans
Exon206884   199   V: 14216537-14216735 Caenorhabditis elegans
Exon206888   340   V: 14216796-14217135 Caenorhabditis elegans
Exon206892   100   V: 14217192-14217291 Caenorhabditis elegans
Exon206896   94   V: 14217648-14217741 Caenorhabditis elegans
Exon206901   64   V: 14218155-14218218 Caenorhabditis elegans
Exon206904   105   V: 14218471-14218575 Caenorhabditis elegans
Exon206908   404   V: 14218626-14219029 Caenorhabditis elegans
Exon206912   289   V: 14219077-14219365 Caenorhabditis elegans
Exon206916   140   V: 14219824-14219963 Caenorhabditis elegans
Exon206920   131   V: 14220006-14220136 Caenorhabditis elegans
Exon206925   287   V: 14226063-14226349 Caenorhabditis elegans
Exon206927   73   V: 14226397-14226469 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T16A9.4c.1 14215345 14226469 -1

1 Sequence

Length
2962

1 Sequence Ontology Term

Identifier Name Description
transcript