WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T16A9.4c Sequence Name  T16A9.4c
Length (nt)  2571   Chromosome Location  V: 14215681-14215857
Chromosome . Primary Identifier  V Chromosome Location . Start  14215681
Chromosome Location . End  14215857
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16A9.4c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52240 NEP-21, isoform c 98.0 856 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00053405
WBRNAi00018761
WBRNAi00035605
WBRNAi00089158

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T16A9.4c 14215681 14215857 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011794 nep-21 T16A9.4 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:T16A9.4c 14215681 14215857 -1
CDS:T16A9.4c 14215904 14216008 -1
CDS:T16A9.4c 14216366 14216483 -1
CDS:T16A9.4c 14216537 14216735 -1
CDS:T16A9.4c 14216796 14217135 -1
CDS:T16A9.4c 14217192 14217291 -1
CDS:T16A9.4c 14217648 14217741 -1
CDS:T16A9.4c 14218155 14218218 -1
CDS:T16A9.4c 14218471 14218575 -1
CDS:T16A9.4c 14218626 14219029 -1
CDS:T16A9.4c 14219077 14219365 -1
CDS:T16A9.4c 14219824 14219963 -1
CDS:T16A9.4c 14220006 14220136 -1
CDS:T16A9.4c 14226063 14226349 -1
CDS:T16A9.4c 14226397 14226414 -1

1 Sequence

Length
2571

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T16A9.4c.1 T16A9.4c.1 2962   V: 14215345-14226469