WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T16A9.4a.1 Sequence Name  T16A9.4a.1
Length (nt)  2878   Chromosome Location  V: 14215349-14220702
Chromosome . Primary Identifier  V Chromosome Location . Start  14215349
Chromosome Location . End  14220702 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16A9.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011794 nep-21 T16A9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T16A9.4a T16A9.4a 2310   V: 14215681-14215857

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T16A9.4a.1 14215349 14220702 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206873   509   V: 14215349-14215857 Caenorhabditis elegans
Exon206874   105   V: 14215904-14216008 Caenorhabditis elegans
Exon206878   118   V: 14216366-14216483 Caenorhabditis elegans
Exon206882   199   V: 14216537-14216735 Caenorhabditis elegans
Exon206886   340   V: 14216796-14217135 Caenorhabditis elegans
Exon206890   100   V: 14217192-14217291 Caenorhabditis elegans
Exon206894   94   V: 14217648-14217741 Caenorhabditis elegans
Exon206900   64   V: 14218155-14218218 Caenorhabditis elegans
Exon206902   105   V: 14218471-14218575 Caenorhabditis elegans
Exon206906   404   V: 14218626-14219029 Caenorhabditis elegans
Exon206910   289   V: 14219077-14219365 Caenorhabditis elegans
Exon206914   140   V: 14219824-14219963 Caenorhabditis elegans
Exon206918   131   V: 14220006-14220136 Caenorhabditis elegans
Exon206922   280   V: 14220423-14220702 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T16A9.4a.1 14215349 14220702 -1

1 Sequence

Length
2878

1 Sequence Ontology Term

Identifier Name Description
transcript