WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53A5.17.1 Sequence Name  C53A5.17.1
Length (nt)  1622   Chromosome Location  V: 14519371-14521100
Chromosome . Primary Identifier  V Chromosome Location . Start  14519371
Chromosome Location . End  14521100 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53A5.17.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00194707 C53A5.17 C53A5.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53A5.17 C53A5.17 1425   V: 14519553-14519813

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C53A5.17.1 14519371 14521100 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon207506   443   V: 14519371-14519813 Caenorhabditis elegans
Exon207507   478   V: 14519869-14520346 Caenorhabditis elegans
Exon207508   701   V: 14520400-14521100 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C53A5.17.1 14519371 14521100 -1

1 Sequence

Length
1622

1 Sequence Ontology Term

Identifier Name Description
transcript