WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40H4A.1a.2 Sequence Name  Y40H4A.1a.2
Length (nt)  2025   Chromosome Location  V: 14564820-14569994
Chromosome . Primary Identifier  V Chromosome Location . Start  14564820
Chromosome Location . End  14569994 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40H4A.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001519 gar-3 Y40H4A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40H4A.1a Y40H4A.1a 1758   V: 14565068-14565155

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y40H4A.1a.2 14564820 14569994 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon207630   336   V: 14564820-14565155 Caenorhabditis elegans
Exon207632   124   V: 14565506-14565629 Caenorhabditis elegans
Exon207636   245   V: 14565678-14565922 Caenorhabditis elegans
Exon207640   179   V: 14566638-14566816 Caenorhabditis elegans
Exon207644   312   V: 14566903-14567214 Caenorhabditis elegans
Exon207649   467   V: 14567984-14568450 Caenorhabditis elegans
Exon207653   88   V: 14568778-14568865 Caenorhabditis elegans
Exon207657   180   V: 14568924-14569103 Caenorhabditis elegans
Exon207662   94   V: 14569901-14569994 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y40H4A.1a.2 14564820 14569994 -1

1 Sequence

Length
2025

1 Sequence Ontology Term

Identifier Name Description
transcript