WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C47E8.8a Sequence Name  C47E8.8a
Length (nt)  4677   Chromosome Location  V: 14698970-14699536
Chromosome . Primary Identifier  V Chromosome Location . Start  14698970
Chromosome Location . End  14699536
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47E8.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46274 SET-5, isoform a 175.0 1558 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00042691
WBRNAi00012083
WBRNAi00091492

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C47E8.8a 14698970 14699536 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008145 set-5 C47E8.8 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:C47E8.8a 14698970 14699536 1
CDS:C47E8.8a 14700109 14700455 1
CDS:C47E8.8a 14700696 14700860 1
CDS:C47E8.8a 14700906 14701010 1
CDS:C47E8.8a 14701315 14701641 1
CDS:C47E8.8a 14701836 14701940 1
CDS:C47E8.8a 14702148 14703680 1
CDS:C47E8.8a 14703730 14703843 1
CDS:C47E8.8a 14703981 14704184 1
CDS:C47E8.8a 14704580 14704681 1
CDS:C47E8.8a 14704796 14704912 1
CDS:C47E8.8a 14704993 14705112 1
CDS:C47E8.8a 14705376 14705492 1
CDS:C47E8.8a 14705818 14705931 1
CDS:C47E8.8a 14706114 14706320 1
CDS:C47E8.8a 14706605 14706764 1
CDS:C47E8.8a 14706995 14707207 1
CDS:C47E8.8a 14707406 14707465 1

1 Sequence

Length
4677

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C47E8.8a.1 C47E8.8a.1 4817   V: 14698966-14707601