WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC412.1a.1 Sequence Name  ZC412.1a.1
Length (nt)  1583   Chromosome Location  V: 14852825-14858603
Chromosome . Primary Identifier  V Chromosome Location . Start  14852825
Chromosome Location . End  14858603 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC412.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013883 npr-13 ZC412.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC412.1a ZC412.1a 1353   V: 14853017-14853092

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC412.1a.1 14852825 14858603 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208379   268   V: 14852825-14853092 Caenorhabditis elegans
Exon208382   150   V: 14853871-14854020 Caenorhabditis elegans
Exon208383   155   V: 14854553-14854707 Caenorhabditis elegans
Exon208384   249   V: 14855486-14855734 Caenorhabditis elegans
Exon208386   54   V: 14855927-14855980 Caenorhabditis elegans
Exon208387   129   V: 14856023-14856151 Caenorhabditis elegans
Exon208388   108   V: 14856201-14856308 Caenorhabditis elegans
Exon208389   98   V: 14856990-14857087 Caenorhabditis elegans
Exon208390   109   V: 14857589-14857697 Caenorhabditis elegans
Exon208391   138   V: 14857807-14857944 Caenorhabditis elegans
Exon208392   125   V: 14858479-14858603 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC412.1a.1 14852825 14858603 -1

1 Sequence

Length
1583

1 Sequence Ontology Term

Identifier Name Description
transcript