WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZC412.1a Sequence Name  ZC412.1a
Length (nt)  1353   Chromosome Location  V: 14853017-14853092
Chromosome . Primary Identifier  V Chromosome Location . Start  14853017
Chromosome Location . End  14853092
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC412.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35920 NPR-13, isoform a 51.9 450 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00058898
WBRNAi00072231
WBRNAi00038048

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZC412.1a 14853017 14853092 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013883 npr-13 ZC412.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZC412.1a 14853017 14853092 -1
CDS:ZC412.1a 14853871 14854020 -1
CDS:ZC412.1a 14854553 14854707 -1
CDS:ZC412.1a 14855486 14855734 -1
CDS:ZC412.1a 14855927 14855980 -1
CDS:ZC412.1a 14856023 14856151 -1
CDS:ZC412.1a 14856201 14856308 -1
CDS:ZC412.1a 14856990 14857087 -1
CDS:ZC412.1a 14857589 14857697 -1
CDS:ZC412.1a 14857807 14857944 -1
CDS:ZC412.1a 14858479 14858565 -1

1 Sequence

Length
1353

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZC412.1a.1 ZC412.1a.1 1583   V: 14852825-14858603