WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28F8.5a.1 Sequence Name  F28F8.5a.1
Length (nt)  733   Chromosome Location  V: 15574098-15575403
Chromosome . Primary Identifier  V Chromosome Location . Start  15574098
Chromosome Location . End  15575403 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28F8.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009223 mdt-28 F28F8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28F8.5a F28F8.5a 603   V: 15574221-15574442

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28F8.5a.1 15574098 15575403 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon210096   345   V: 15574098-15574442 Caenorhabditis elegans
Exon210098   323   V: 15574746-15575068 Caenorhabditis elegans
Exon210100   65   V: 15575339-15575403 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28F8.5a.1 15574098 15575403 -1

1 Sequence

Length
733

1 Sequence Ontology Term

Identifier Name Description
transcript