WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F28F8.5a Sequence Name  F28F8.5a
Length (nt)  603   Chromosome Location  V: 15574221-15574442
Chromosome . Primary Identifier  V Chromosome Location . Start  15574221
Chromosome Location . End  15574442
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28F8.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE09759 MDT-28, isoform a 22.3 200 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00045851
WBRNAi00112429
WBRNAi00008716
WBRNAi00025300
WBRNAi00066892
WBRNAi00116395
WBRNAi00116343

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F28F8.5a 15574221 15574442 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009223 mdt-28 F28F8.5 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:F28F8.5a 15574221 15574442 -1
CDS:F28F8.5a 15574746 15575068 -1
CDS:F28F8.5a 15575339 15575396 -1

1 Sequence

Length
603

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F28F8.5a.1 F28F8.5a.1 733   V: 15574098-15575403