WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05G11.1b.1 Sequence Name  T05G11.1b.1
Length (nt)  1410   Chromosome Location  V: 15926672-15928209
Chromosome . Primary Identifier  V Chromosome Location . Start  15926672
Chromosome Location . End  15928209 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05G11.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011505 pzf-1 T05G11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05G11.1b T05G11.1b 1410   V: 15926672-15926716

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05G11.1b.1 15926672 15928209 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon210866   45   V: 15926672-15926716 Caenorhabditis elegans
Exon210868   941   V: 15926797-15927737 Caenorhabditis elegans
Exon210869   424   V: 15927786-15928209 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05G11.1b.1 15926672 15928209 -1

1 Sequence

Length
1410

1 Sequence Ontology Term

Identifier Name Description
transcript