WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05G11.1b Sequence Name  T05G11.1b
Length (nt)  1410   Chromosome Location  V: 15926672-15926716
Chromosome . Primary Identifier  V Chromosome Location . Start  15926672
Chromosome Location . End  15926716
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05G11.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45365 PZF-1, isoform b 52.8 469 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00052548
WBRNAi00052549
WBRNAi00014340
WBRNAi00018241
WBRNAi00035222
WBRNAi00062355
WBRNAi00103331

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05G11.1b 15926672 15926716 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011505 pzf-1 T05G11.1 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05G11.1b 15926672 15926716 -1
CDS:T05G11.1b 15926797 15927737 -1
CDS:T05G11.1b 15927786 15928209 -1

1 Sequence

Length
1410

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05G11.1b.1 T05G11.1b.1 1410   V: 15926672-15928209