WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10C6.4.1 Sequence Name  T10C6.4.1
Length (nt)  996   Chromosome Location  V: 16020342-16022652
Chromosome . Primary Identifier  V Chromosome Location . Start  16020342
Chromosome Location . End  16022652 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10C6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005935 srx-44 T10C6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10C6.4 T10C6.4 969   V: 16020369-16020373

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10C6.4.1 16020342 16022652 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211111   32   V: 16020342-16020373 Caenorhabditis elegans
Exon211112   94   V: 16020657-16020750 Caenorhabditis elegans
Exon211113   164   V: 16021410-16021573 Caenorhabditis elegans
Exon211114   147   V: 16021632-16021778 Caenorhabditis elegans
Exon211115   139   V: 16021859-16021997 Caenorhabditis elegans
Exon211116   171   V: 16022138-16022308 Caenorhabditis elegans
Exon211117   140   V: 16022359-16022498 Caenorhabditis elegans
Exon211118   109   V: 16022544-16022652 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10C6.4.1 16020342 16022652 1

1 Sequence

Length
996

1 Sequence Ontology Term

Identifier Name Description
transcript