WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C47A10.1 Sequence Name  C47A10.1
Length (nt)  3885   Chromosome Location  V: 17755897-17755940
Chromosome . Primary Identifier  V Chromosome Location . Start  17755897
Chromosome Location . End  17755940
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47A10.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE15714 PGP-9 142.5 1294 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00042636
WBRNAi00012052
WBRNAi00077359
WBRNAi00022567
WBRNAi00001328
WBRNAi00070085

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C47A10.1 17755897 17755940 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004003 pgp-9 C47A10.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:C47A10.1 17755897 17755940 1
CDS:C47A10.1 17755990 17756146 1
CDS:C47A10.1 17756212 17756379 1
CDS:C47A10.1 17757178 17757311 1
CDS:C47A10.1 17758019 17759040 1
CDS:C47A10.1 17760066 17760487 1
CDS:C47A10.1 17760537 17761066 1
CDS:C47A10.1 17761488 17762277 1
CDS:C47A10.1 17762343 17762549 1
CDS:C47A10.1 17764196 17764469 1
CDS:C47A10.1 17764514 17764650 1

1 Sequence

Length
3885

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C47A10.1.1 C47A10.1.1 3991   V: 17755892-17764751