WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47A10.6.1 Sequence Name  C47A10.6.1
Length (nt)  1223   Chromosome Location  V: 17780269-17783642
Chromosome . Primary Identifier  V Chromosome Location . Start  17780269
Chromosome Location . End  17783642 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47A10.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008128 srab-12 C47A10.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47A10.6 C47A10.6 1041   V: 17780448-17780582

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C47A10.6.1 17780269 17783642 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon214718   314   V: 17780269-17780582 Caenorhabditis elegans
Exon214719   65   V: 17780682-17780746 Caenorhabditis elegans
Exon214720   196   V: 17781384-17781579 Caenorhabditis elegans
Exon214721   108   V: 17782149-17782256 Caenorhabditis elegans
Exon214722   75   V: 17782306-17782380 Caenorhabditis elegans
Exon214723   232   V: 17782493-17782724 Caenorhabditis elegans
Exon214725   233   V: 17783410-17783642 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C47A10.6.1 17780269 17783642 -1

1 Sequence

Length
1223

1 Sequence Ontology Term

Identifier Name Description
transcript