WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E01B7.1.2 Sequence Name  E01B7.1.2
Length (nt)  2659   Chromosome Location  V: 17924916-17934234
Chromosome . Primary Identifier  V Chromosome Location . Start  17924916
Chromosome Location . End  17934234 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01B7.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008441 usp-50 E01B7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E01B7.1 E01B7.1 2436   V: 17925013-17925116

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:E01B7.1.2 17924916 17934234 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon214811   14   V: 17924916-17924929 Caenorhabditis elegans
Exon214812   134   V: 17924983-17925116 Caenorhabditis elegans
Exon214815   145   V: 17925380-17925524 Caenorhabditis elegans
Exon214817   81   V: 17925967-17926047 Caenorhabditis elegans
Exon214819   191   V: 17926572-17926762 Caenorhabditis elegans
Exon214821   84   V: 17927121-17927204 Caenorhabditis elegans
Exon214823   172   V: 17927256-17927427 Caenorhabditis elegans
Exon214825   447   V: 17928050-17928496 Caenorhabditis elegans
Exon214827   98   V: 17928556-17928653 Caenorhabditis elegans
Exon214829   160   V: 17929621-17929780 Caenorhabditis elegans
Exon214831   174   V: 17930087-17930260 Caenorhabditis elegans
Exon214834   108   V: 17930552-17930659 Caenorhabditis elegans
Exon214838   120   V: 17931205-17931324 Caenorhabditis elegans
Exon214840   144   V: 17931398-17931541 Caenorhabditis elegans
Exon214843   96   V: 17932188-17932283 Caenorhabditis elegans
Exon214845   153   V: 17932450-17932602 Caenorhabditis elegans
Exon214849   120   V: 17933506-17933625 Caenorhabditis elegans
Exon214851   218   V: 17934017-17934234 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:E01B7.1.2 17924916 17934234 1

1 Sequence

Length
2659

1 Sequence Ontology Term

Identifier Name Description
transcript