WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:E01B7.1 Sequence Name  E01B7.1
Length (nt)  2436   Chromosome Location  V: 17925013-17925116
Chromosome . Primary Identifier  V Chromosome Location . Start  17925013
Chromosome Location . End  17925116
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01B7.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42799 USP-50 90.9 811 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00094699
WBRNAi00043564
WBRNAi00057749
WBRNAi00008585
WBRNAi00024976
WBRNAi00064998
WBRNAi00030450
WBRNAi00037623
WBRNAi00001621
WBRNAi00064419

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:E01B7.1 17925013 17925116 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008441 usp-50 E01B7.1 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:E01B7.1 17925013 17925116 1
CDS:E01B7.1 17925380 17925524 1
CDS:E01B7.1 17925967 17926047 1
CDS:E01B7.1 17926572 17926762 1
CDS:E01B7.1 17927121 17927204 1
CDS:E01B7.1 17927256 17927427 1
CDS:E01B7.1 17928050 17928496 1
CDS:E01B7.1 17928556 17928653 1
CDS:E01B7.1 17929621 17929780 1
CDS:E01B7.1 17930087 17930260 1
CDS:E01B7.1 17930552 17930659 1
CDS:E01B7.1 17931205 17931324 1
CDS:E01B7.1 17931398 17931541 1
CDS:E01B7.1 17932188 17932283 1
CDS:E01B7.1 17932450 17932602 1
CDS:E01B7.1 17933506 17933625 1
CDS:E01B7.1 17934017 17934055 1

1 Sequence

Length
2436

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:E01B7.1.2 E01B7.1.2 2659   V: 17924916-17934234
Transcript:E01B7.1.1 E01B7.1.1 2627   V: 17924985-17934218