WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y59A8B.1a Sequence Name  Y59A8B.1a
Length (nt)  4926   Chromosome Location  V: 17936857-17937048
Chromosome . Primary Identifier  V Chromosome Location . Start  17936857
Chromosome Location . End  17937048
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59A8B.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26205 DPY-21, isoform a 181.9 1641 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00057742
WBRNAi00037624
WBRNAi00098754
WBRNAi00086943
WBRNAi00086945
WBRNAi00086944
WBRNAi00087176
WBRNAi00086946
WBRNAi00087213
WBRNAi00098753
WBRNAi00086947
WBRNAi00117567
WBRNAi00116018

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y59A8B.1a 17936857 17937048 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001080 dpy-21 Y59A8B.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y59A8B.1a 17936857 17937048 -1
CDS:Y59A8B.1a 17937409 17937480 -1
CDS:Y59A8B.1a 17938153 17938476 -1
CDS:Y59A8B.1a 17939468 17939759 -1
CDS:Y59A8B.1a 17940761 17941006 -1
CDS:Y59A8B.1a 17943129 17946540 -1
CDS:Y59A8B.1a 17947020 17947087 -1
CDS:Y59A8B.1a 17947631 17947780 -1
CDS:Y59A8B.1a 17947948 17948042 -1
CDS:Y59A8B.1a 17948906 17948956 -1
CDS:Y59A8B.1a 17949005 17949028 -1

1 Sequence

Length
4926

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y59A8B.1a.1 Y59A8B.1a.1 5666   V: 17936282-17949193