WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51A2D.18.1 Sequence Name  Y51A2D.18.1
Length (nt)  1934   Chromosome Location  V: 18481073-18487258
Chromosome . Primary Identifier  V Chromosome Location . Start  18481073
Chromosome Location . End  18487258 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51A2D.18.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013083 Y51A2D.18 Y51A2D.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51A2D.18 Y51A2D.18 1653   V: 18481209-18481418

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.18.1 18481073 18487258 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon215827   346   V: 18481073-18481418 Caenorhabditis elegans
Exon215828   126   V: 18481991-18482116 Caenorhabditis elegans
Exon215829   68   V: 18482163-18482230 Caenorhabditis elegans
Exon215830   227   V: 18482414-18482640 Caenorhabditis elegans
Exon215831   101   V: 18483457-18483557 Caenorhabditis elegans
Exon215832   84   V: 18483603-18483686 Caenorhabditis elegans
Exon215833   136   V: 18483891-18484026 Caenorhabditis elegans
Exon215834   108   V: 18484372-18484479 Caenorhabditis elegans
Exon215835   242   V: 18484907-18485148 Caenorhabditis elegans
Exon215836   143   V: 18485209-18485351 Caenorhabditis elegans
Exon215837   353   V: 18486906-18487258 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51A2D.18.1 18481073 18487258 -1

1 Sequence

Length
1934

1 Sequence Ontology Term

Identifier Name Description
transcript