WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69H2.3k.1 Sequence Name  Y69H2.3k.1
Length (nt)  2405   Chromosome Location  V: 18656094-18664118
Chromosome . Primary Identifier  V Chromosome Location . Start  18656094
Chromosome Location . End  18664118 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69H2.3k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013481 Y69H2.3 Y69H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69H2.3k Y69H2.3k 2286   V: 18656191-18656366

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y69H2.3k.1 18656094 18664118 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216376   273   V: 18656094-18656366 Caenorhabditis elegans
Exon216381   186   V: 18657116-18657301 Caenorhabditis elegans
Exon216385   286   V: 18657359-18657644 Caenorhabditis elegans
Exon216389   139   V: 18657695-18657833 Caenorhabditis elegans
Exon216393   132   V: 18658354-18658485 Caenorhabditis elegans
Exon216397   141   V: 18658531-18658671 Caenorhabditis elegans
Exon216401   120   V: 18658993-18659112 Caenorhabditis elegans
Exon216405   120   V: 18659159-18659278 Caenorhabditis elegans
Exon216409   85   V: 18659336-18659420 Caenorhabditis elegans
Exon216413   54   V: 18659464-18659517 Caenorhabditis elegans
Exon216465   90   V: 18661088-18661177 Caenorhabditis elegans
Exon216472   90   V: 18661622-18661711 Caenorhabditis elegans
Exon216486   192   V: 18662359-18662550 Caenorhabditis elegans
Exon216497   195   V: 18662617-18662811 Caenorhabditis elegans
Exon216508   136   V: 18663726-18663861 Caenorhabditis elegans
Exon216519   77   V: 18663911-18663987 Caenorhabditis elegans
Exon216530   89   V: 18664030-18664118 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y69H2.3k.1 18656094 18664118 -1

1 Sequence

Length
2405

1 Sequence Ontology Term

Identifier Name Description
transcript